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Showing posts with the label Bioinformatics

Why R Library 'ssw' Cannot Find Python Module Installed Via Pip3, Although Pip3 Module Installation Is Satisfied?

I am on Ubuntu 20.04.1 LTS focal, and using R. I want to install in R a library to perform local se… Read more Why R Library 'ssw' Cannot Find Python Module Installed Via Pip3, Although Pip3 Module Installation Is Satisfied?

Hamming Distance Matrix For Multiple Sequences

I have a FASTA file with IDs and corresponding DNA sequences which I have parsed and stored into a … Read more Hamming Distance Matrix For Multiple Sequences

Finding Matching Keys In Two Large Dictionaries And Doing It Fast

I am trying to find corresponding keys in two different dictionaries. Each has about 600k entries.… Read more Finding Matching Keys In Two Large Dictionaries And Doing It Fast

Python: Multiple Consensus Sequences

starting from a list of dna sequences, I must have in return all the possible consensus (the result… Read more Python: Multiple Consensus Sequences

Finding Matching Keys In Two Large Dictionaries And Doing It Fast

I am trying to find corresponding keys in two different dictionaries. Each has about 600k entries.… Read more Finding Matching Keys In Two Large Dictionaries And Doing It Fast

Getting Intersection Of Two Lists In Python

I have two lists of genes that i'm analyzing. Essentially I want to sort the elements of these … Read more Getting Intersection Of Two Lists In Python